| 核酸数据库 | 点击: 作者: 来源: 时间: 2006-11-11 本站论坛
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◎ BioSCAN - 生物学序列比较分析Biological Sequence Comparative Analysis at U. North Caroline W3 ◎ BMCD - 生物大分子数据库Biological Macromolecule Crystallization Database at CARB ◎ Codon Usage -基因序列中不同ORF分析 Analysis of Different ORFs in a Gene Sequence at U. Minnesota W3 ◎ CpGIsle - CpG 数据库CpG Islands Database at BEN, Belgium W3 ◎ Darwin - 核酸多肽数据分析和修复Data Analysis and Retrieval With Indexed Nucleotide/Peptide Sequences at ETH-Zürich, Switzerland W3 ◎ dbEST - 表达序列标志数据库Database of Expressed Sequence Tags at NCBI W3 ◎ DBGET - 完整的数据库修复系统Integrated Database Retrieval System (w/ diagram links) at GenomeNet, Japan W3 ◎ DDBJ - 日本DNA的数据库DNA Database of Japan at National Institute of Genetics, Japan Gopher ◎ Dot Plot -DNA序列的内部比较Compare a DNA Sequence with Itself at U. Minnesota W3 ◎ DrugBank - 三维药物结构数据库Three-dimensional Drug Structure Databank at NIH W3 ◎ EC Enzyme at Johns Hopkins and EC Number Table at GenomeNet, Japan and GenoBase Enzyme Index at NIH W3 ◎ ECDC - 大肠杆菌数据库E. coli Database Collection at Uni-Gießen, Germany W3 ◎ EMBL - 核酸序列数据库Nucleotide Sequence Database and EMBL-New Entries at EMBnet-Basel Gopher ◎ EMNEW - 新核酸序列检索Index of New EMBL Sequences at EBI, UK W3 ◎ EMP Compound and EMP Pathways - 酶及代谢途径数据库Selkov Enzyme and Metabolic Pathway (EMP) Database at NIH W3 ◎ EMP Metabolic Pathways - 代谢途径指南Navigation in Metabolic Pathways from MCS-Computational Biology at Argonne National Laboratory W3 ◎ ENZYME -酶数据库 The Enzyme Data Bank at ExPASy, Switzerland W3 ◎ Enzyme Structures Database -酶结构 Structures of Enzymes Deposited in the PDB at UCL-London, UK W3 ◎ EPD - 真核启动子数据库Eucaryotic Promoter Database at EMBL-Heidelberg, Germany and EPD at GenomeNet, Japan W3 ◎ EPO - 欧洲专利局核酸数据库European Patent Office Nucleotide Database at BiO/U. Oslo, Norway W3 and EPO at CSC, Finland Gopher ◎ FASTA - 核酸序列的数据库比较查寻Compare a Nucleic Acid Sequence to Nucleotide Sequence Databases (w/ updates) at EBI, UK, FASTA (Berlin, Vectorbank, etc) at Stanford U., FASTA at EERIE-Nimes, France and FASTA at CRIHAN, France W3 ◎ FASTPAT - FASTA模型数据库检索FASTA-based Pattern Database Search (see Documentation) at Baylor College of Medicine W3 ◎ FlyBase -果蝇的基因库 Genetic and Molecular Database for Drosophila at Harvard U. W3 ◎ GDB - 人类基因组数据库Human Genome Data Base at Johns Hopkins W3 ◎ GenBank Database 基因银行(+Updates) at NCBI and GenBank-Fetch at Washington U. W3 ◎ Gene Finder - 预测基因结构、内含子、外显子Predict Gene Structure, Internal Exons and Splicing Sites in DNA and Exon-Exon Junstion in cDNA at Baylor College of Medicine W3 ◎ GenLang - 查找核算序列中的基因和高级结构Find Genes and Other Higher-Order Features in Nucleotide Sequences at CBIL-U. Pennsylvania W3 ◎ GenoBase at NIH W3 ◎ Genome Databases and Genome Centers -基因组数据中心环球网联结点 World Wide Links at EERIE-Nimes, France W3 ◎ Genome Workstation - 遗传组相关联结 Genome Related Links at Roslin Institute, UK W3 ◎ Genomic Maps -基因组特别资源联结 Links to Genome Specific Resources at Biotech-Indiana W3 ◎ Grail - DNA序列翻译分析Analysis of the Protein Coding Potential of a DNA Sequence (see Documentation) at ORNL W3 ◎ GSDB - 基因组序列数据库Genome Sequence Database at NCGR W3 ◎ GuessProt - 选择特定等电点和分子量的蛋白质Selects SwissProt proteins given pI and Mw at ExPASy, Switzerland W3 ◎ HHS - SwissProt 和PDB序列系统分类数据库SwissProt and PDB Systematic Sequence Classification Database at Washington U. W3 ◎ HOVERGEN - 同源脊椎动物基因数据库Database of Homologous Vertebrate Genes at CAOS/CAMM, The Netherlands W3 ◎ Klotho - 新发现生物化合物数据库Biochemical Compounds Declarative Database at Washington U. W3 ◎ LALIGN - 计算两个序列间的最佳排列Calculates the N-Best Local Alignments Between Two Sequences at EERIE-Nimes, France W3 ◎ LFASTA - 两个序列间局部相似性L查找ocal Similarity Searches Between Two Sequences Showing Local Alignments at EERIE-Nimes, France W3 ◎ LIGAND - 酶反应的配体化学数据库Ligand Chemical Database for Enzyme Reactions at GenomeNet, Japan W3 ◎ LiMB - 分子生物学数据库名录Listing of Molecular Biology Databases at NIH Gopher and LiMB at EMBL-Heidelberg W3 ◎ Metabolic Database - 代谢反应和途径Metabolic Reactions and Pathways at CGSC-Yale U. and Metabolic Database at INRA-Moulon, France W3 ◎ MGD - 鼠基因组数据库Mouse Genome Database at Jackson Laboratory W3 ◎ MHCPEP - 主要组织亲和性复合体连接多肽数据库Database of Major Histocompatibility Complex (MHC) Binding Peptides at WEHI-Melbourne, Australia Gopher ◎ MIPS-Alert - 自动序列信息查询Automated Sequence Information Queries at MIPS, Germany W3 ◎ Molecules R US - PDB 文件的互动文本和图像Interactive Text and Images of PDB Files at NIH W3 ◎ MPBD - 分子探针数据库Molecular Probe Data Base at EMBL-Heidelberg W3 and MPDB at U. Agricultural Sciences, Sweden Gopher ◎ MOOSE - 提取PDB中大分子信息Macromolecular Object Oriented Search Engine to Extract PDB Contained Information at Columbia U. W3 ◎ MSA -多序列排列 Multiple Sequence Alignment at Washington U. W3 ◎ Multiple Sequence Alignments - CLUSTAL-W, MAP, and PIMA alignments at Baylor College of Medicine W3 ◎ NDB - 核酸数据库Nucleic Acid Database at Rutgers U. W3 ◎ NRL_3D -PDB 序列结构数据库Sequence/Structure Database derived from PDB at Johns Hopkins and NRL_3D at EMBL-Heidelberg W3 NRSub -Bacillus subtilis的非富余结构DNA序列数据库A Non-Redundant DNA Sequence Database for Bacillus subtilis at National Institute of Genetics, Japan W3 ◎ NuclPepSearch -在SwissProt中查找核酸序列 Search SwissProt for a Nucletide Sequence at ETH-Zürich, Switzerland W3 ◎ OMIM - 在线人类孟德尔遗传Online Mendelian Inheritance in Man at Johns Hopkins W3 Organelle Genome -序列数据库 A Sequence Database at U. Montreal Gopher ◎ Organisms and Strains -有机体和细胞特别数据库的连接 Links to Databases Specific to Organism and Cell Collections at Biotech-Indiana W3 ◎ PDB At A Glance - PDB文件的接入Hierarchic Access to PDB Files at NIH W3 ◎ PDBFINDER - PDB,DSSP,HSSP信息数据库A Database Containing PDB, DSSP and HSSP Information (see Documentation) at EMBL-Heidelberg W3 ◎ PepPepSearch - 检索SwissProt中的多肽序列Search SwissProt for a Peptide Sequence at ETH-Zürich, Switzerland W3 ◎ Plant EST Analysis -不同植物cDNA/EST 序列相似性分析Similarity Analysis of Different Plant cDNA/EST Sequences at U. Minnesota W3 ◎ Phospepsort -消化磷酸化多肽序列 Digest Phosphorylated Peptide Sequences at EERIE-Nimes, France W3 at Johns Hopkins W3 ◎ PIRALN - PIR序列排列数据库Database of Sequence Alignments based on PIR at EMBL-Heidelberg W3 equence at U. Minnesota W3 ◎ Poland -预测双链DNA&RNA热变性性能 Calculate the Thermal Denaturation Profile of Double Stranded RNA or DNA at Uni-Düsseldorf, Germany W3 ◎ PUMA - 单细胞生物新陈代谢和排列的系统发生Phylogeny of Unicellular Organims with Metabolism and Alignments from MCS-Computational Biology at Argonne National Laboratory W3
◎ Poland -预测双链DNA&RNA热变性性能 Calculate the Thermal Denaturation Profile of Double Stranded RNA or DNA at Uni-Düsseldorf, Germany W3 Sanger Centre, UK and ProDom at EMBL-Heidelberg W3 ◎ ProfileScan -查找档案馆中序列 Search a Sequence Against a Library of Profiles at ISREC, Switzerland W3 ◎ RDP - 核糖体数据库工程Ribosomal Database Project at U. Illinois W3 ◎ ReBase - 限制性酶数据库Restriction Enzyme Database and ReBase-Search at New England Biolabs, ReBase at EMBL-Heidelberg and ReBase at Johns Hopkins W3 ◎ Primer - 从基因序列中选择PCR引物Select PCR Primers in a Gene Sequence at WICGR-MIT and Primer at U. Minnesota W3 ◎ RNA Secondary Structures - 一类内含子和rRNA信息Information on Group I Introns and rRNA at U. Colorado-Boulder W3 ◎ rRNA - 核糖亚基RNA序列数据库Databases of Ribosomal Subunit RNA Sequences at U. Antwerp, Belgium W3 ◎ SRSWWW - 分子生物学数据库网络浏览器Network Browser for Databanks in Molecular Biology (w/ diagram links) at EMBL-Heidelberg W3 ◎ SRSWWW-Directory - 生物学数据库SRSWWW目录网络浏览器Directory of SRSWWW Network Browsers for Biological Databanks and SRSWWW-Global Status at EMBnet-Basel W3 ◎ SSEARCH - Smith-Waterman法统一序列比较Universal Sequence Comparison Using the Smith-Waterman Algorithm at EERIE-Nimes, France W3 ◎ RSVP - DNA序列分析的快速推测Rapid Sequence Visualization in Postscript for Analysis of DNA Sequences at CBIL-U. Pennsylvania W3 ◎ Sequence Annotation - NCBI序列详解Annotations on NCBI Sequences at Baylor College of Medicine W3 ◎ Sequence Translation - 基因序列翻译Translate Gene Sequences at U. Minnesota W3 ◎ Sleuth - PDB文件中氨基酸构象和溶剂Amino Acid Conformation and Solvent Accessibility of PDB Files at Washington U. FTP ◎ STS Pipeline - 用复制检查,重复序列检索、限制性分析、载体鉴定和BLAST检索的短序列DNA分析,和STS引物选择Analysis and STS Primer Picking of Short DNA Sequences with Duplicate Checking, Sequence Repeat Finding, Restriction Analysis, Vector Identification and BLAST Searching at MIT W3 ◎ Swiss-Shop -自动SwissProt和Prosite查询 Automated SwissProt and Prosite Information Queries at ExPASy, Switzerland W3 ◎ TBASE - 转基因目标突变数据库Transgenic/Targeted Mutation Database at Johns Hopkins W3 ◎ SWISSNEW - 新SwissProt序列New SwissProt Sequences at EBI, UK W3 Frames of GenBank Sequences at EERIE-Nimes, France W3 ◎ TFD - 转录因子数据库Transcription Factor Database at NIH Gopher ◎ TFFACTOR and TFSITE - 转录因子数据Transcription Factor Data at EMBL-Heidelberg W3 ◎ Tm -寡核苷酸熔点决定 Oligonucleotide Melting Point Determination at U. Minnesota W3 ◎ VisAlign -氨基酸序列彩色排列图 The Alignment Color Viewer to Color 2 Aligned Amino Acid Sequences by Hydrophobicity at EBI, UK W3 ◎ WebLogo - 序列标识代Sequence Logo Generation at Cambridge U., UK 核酸数据库集锦 |
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