| TAIL-PCR to clone flanking sequence from Feldmann | 点击: 作者:51protocol收集 来源: 时间: 2007-03-29 本站论坛
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Thermo-cycling: #10 to #18, and then #19, #20, #21, #53
Cycling #10: 92oC; 5 min;[Add 0.2 ul Taq polymerase (Perkins-Elmer's or Stratagene's) after 4 min denaturation, link to clcling #18
Cycling #18 (5 cycles of the following):
94oC, 1'
62oC, 1'
72oC2.5'
Cycling #19 (1 cycle of the following):
94oC, 1'
25oC, 3'
Ramp to 72oC in 3'
72oC2.5'
Cycling #20 (15 cycles of the following):
94oC, 30''
68oC, 1'
72oC, 2.5'
94oC, 30''
68oC, 1'
72oC; 2.5'
94oC, 30''
44oC; 1'
72oC; 2.5'
cycling #21:
72oC, 5'
Cycling #53
4oC. soak
Dilute the primary reaction product with water to 1/50, then set up the 2nd reaction
44ul PCR stock
2.5ul TL-2 (50uM)
2.5ul AD-2 or OPA-2 (50uM)
1ul 1/50 diluted 1st reaction
Thermo-cyclings: #10 (0.2u. Taq polymerase was added after 4 min denaturation) to #22, and then #21, #53. Cycling #22 for 12 cycles:
94oC, 30''
64oC, 1'
72oC, 2.5'
94oC,30''
64oC, 1'
72oC, 2.5'
94oC, 30''
44oC, 1'
72oC, 2.5'
Dilute the 2nd PCR product to 1/50 with water, and carry out the tertiary reaction
44ul PCR stock
2.5ul TL-1
2.5ul AD-2 or OPA-2 (50uM)
1ul 1/50 diluted 2nd reaction product
Thermo-cycling: #10 (0.2ul Taq polymerase was added after 4' denaturation in #10), and then #12, #52 . Thermo-cycling #12 for 25 cycles:
94oC,1'
37oC, 1
72oC, 1'
1.5% agarose electrophoresis of all three PCR reaction products.
Purify the PCR products using Pharmacia's Spin-Column S-300.
Cloning PCR product by using Stratagene's PCR polishing kit and pCRScript Amp (SK ) cloning kit or my favorite one-tube cloning method .
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